HHsearch alignment for GI: 254780693 and conserved domain: COG1356
>COG1356 tfx Transcriptional regulator [DNA replication, recombination and repair].
Probab=92.40 E-value=0.082 Score=32.09 Aligned_cols=52 Identities=27% Similarity=0.261 Sum_probs=41.8
Q ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 4449989999999998799978999994999889999999999980799789
Q gi|254780693|r 171 ARNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRI 222 (235)
Q Consensus 171 ~~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~ 222 (235)
T Consensus 6 dtflte~qikvl~lRekG~tQ~eIA~~L~TTraNvSaIEkrA~enIekarnT 57 (143)
T COG1356 6 DTFLTEQQIKVLVLREKGLTQSEIARILKTTRANVSAIEKRALENIEKARNT 57 (143)
T ss_pred HCEEEHHHEEEEEHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 1110023023565264056489999997545101799999999989999889