HHsearch alignment for GI: 254780693 and conserved domain: COG1356

>COG1356 tfx Transcriptional regulator [DNA replication, recombination and repair].
Probab=92.40  E-value=0.082  Score=32.09  Aligned_cols=52  Identities=27%  Similarity=0.261  Sum_probs=41.8

Q ss_pred             CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
Q ss_conf             4449989999999998799978999994999889999999999980799789
Q gi|254780693|r  171 ARNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRI  222 (235)
Q Consensus       171 ~~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~  222 (235)
T Consensus         6 dtflte~qikvl~lRekG~tQ~eIA~~L~TTraNvSaIEkrA~enIekarnT   57 (143)
T COG1356           6 DTFLTEQQIKVLVLREKGLTQSEIARILKTTRANVSAIEKRALENIEKARNT   57 (143)
T ss_pred             HCEEEHHHEEEEEHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             1110023023565264056489999997545101799999999989999889