HHsearch alignment for GI: 254780693 and conserved domain: COG2865
>COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].
Probab=90.45 E-value=0.53 Score=26.31 Aligned_cols=42 Identities=29% Similarity=0.435 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHHHHC--CCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 499899999999987--999789999949998899999999999
Q gi|254780693|r 173 NLTERETSCLQLAGD--GYTSEEIAEKLGLSVHTVNAYLGSATV 214 (235)
Q Consensus 173 ~LT~RE~evL~l~a~--G~t~~eIA~~L~iS~~TV~~hl~~i~~ 214 (235)
T Consensus 399 ~~~~~~~~il~~~~en~~~T~~~L~~~l~is~~~i~r~i~~Lv~ 442 (467)
T COG2865 399 SLSERQEKILELIKENGKVTARELREILGISSETIRRRIANLVK 442 (467)
T ss_pred CHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHC
T ss_conf 76677899999975266558899998857564569999999844