HHsearch alignment for GI: 254780693 and conserved domain: COG3413

>COG3413 Predicted DNA binding protein [General function prediction only].

Probab=97.55  E-value=0.0009  Score=46.05  Aligned_cols=45  Identities=33%  Similarity=0.448  Sum_probs=40.6

Q ss_pred             CCCCHHHHHHHHHHH--------CCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             449989999999998--------799978999994999889999999999980
Q gi|254780693|r  172 RNLTERETSCLQLAG--------DGYTSEEIAEKLGLSVHTVNAYLGSATVKL  216 (235)
Q Consensus       172 ~~LT~RE~evL~l~a--------~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  216 (235)
T Consensus       154 ~~LTdrQ~~vL~~A~~~GYFd~PR~~~l~dLA~~lGISkst~~ehLRrAe~Kl  206 (215)
T COG3413         154 NDLTDRQLEVLRLAYKMGYFDYPRRVSLKDLAKELGISKSTLSEHLRRAERKL  206 (215)
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             46999999999999985898887658999999995998889999999999999