HHsearch alignment for GI: 254780693 and conserved domain: COG3415

>COG3415 Transposase and inactivated derivatives [DNA replication, recombination, and repair].
Probab=94.21  E-value=0.11  Score=31.30  Aligned_cols=41  Identities=24%  Similarity=0.374  Sum_probs=35.3

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             99899999999987999789999949998899999999999
Q gi|254780693|r  174 LTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATV  214 (235)
Q Consensus       174 LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~  214 (235)
T Consensus         7 ~~~R~~~~~~~~~~G~S~re~Ak~~gvs~sTvy~wv~r~~e   47 (138)
T COG3415           7 NDLRERVVDAVVGEGLSCREAAKRFGVSISTVYRWVRRYRE   47 (138)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf             89999999999976854999999969229999999987333