HHsearch alignment for GI: 254780693 and conserved domain: PRK05803

>PRK05803 sporulation sigma factor SigK; Reviewed.

Probab=96.68  E-value=0.0048  Score=40.87  Aligned_cols=46  Identities=33%  Similarity=0.339  Sum_probs=42.4

Q ss_pred             CCCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             44998999999999-----87999789999949998899999999999807
Q gi|254780693|r  172 RNLTERETSCLQLA-----GDGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       172 ~~LT~RE~evL~l~-----a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       173 ~~L~~REr~II~~RfGL~~~~~~Tl~eIg~~lgiSrERVRQIe~~Al~KLr  223 (228)
T PRK05803        173 DILDPREKEVIEMRYGLGDGKEKTQREIAKALGISRSYVSRIEKKALKKLF  223 (228)
T ss_pred             HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             518988999999986478999715999999989799999999999999999