HHsearch alignment for GI: 254780693 and conserved domain: PRK06596

>PRK06596 RNA polymerase factor sigma-32; Reviewed.

Probab=96.67  E-value=0.027  Score=35.55  Aligned_cols=45  Identities=27%  Similarity=0.319  Sum_probs=40.6

Q ss_pred             CCCHHHHHHHHHHH---CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             49989999999998---7999789999949998899999999999807
Q gi|254780693|r  173 NLTERETSCLQLAG---DGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       173 ~LT~RE~evL~l~a---~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       230 ~L~~REr~Il~~Ry~~d~~~TL~EIg~~lgiSrERVRQIe~kAL~KLR  277 (284)
T PRK06596        230 TLDERSRDIIEARWLDDDKSTLQELAAEYGVSAERIRQIEKNAMKKLK  277 (284)
T ss_pred             HCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             099999999999767999948999999979799999999999999999