HHsearch alignment for GI: 254780693 and conserved domain: PRK07500

>PRK07500 rpoH2 RNA polymerase factor sigma-32; Reviewed.

Probab=96.76  E-value=0.018  Score=36.81  Aligned_cols=45  Identities=36%  Similarity=0.398  Sum_probs=40.4

Q ss_pred             CCCHHHHHHHHH---HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             499899999999---987999789999949998899999999999807
Q gi|254780693|r  173 NLTERETSCLQL---AGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       173 ~LT~RE~evL~l---~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       227 ~L~eREr~Ii~~r~~~~e~~TL~EIg~~lgvSreRVRQIe~kAL~KLR  274 (289)
T PRK07500        227 TLNERELFIIRERRLREDGATLEALGEELGISKERVRQIEARALEKLR  274 (289)
T ss_pred             CCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             499999999999766899858999999979799999999999999999