HHsearch alignment for GI: 254780693 and conserved domain: PRK11337
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional.
Probab=92.00 E-value=0.47 Score=26.69 Aligned_cols=18 Identities=6% Similarity=0.026 Sum_probs=11.1
Q ss_pred HHHHHHHHHCCCCEEEEE
Q ss_conf 999999985837858998
Q gi|254780693|r 20 RLHLIQNRIKARNFALYT 37 (235)
Q Consensus 20 ~l~~l~~~~~~~~f~~~~ 37 (235)
T Consensus 63 TVvRf~kkLGf~Gf~efK 80 (293)
T PRK11337 63 MIVKVAKLLGFSGFRNLR 80 (293)
T ss_pred HHHHHHHHHCCCCHHHHH
T ss_conf 999999995789789999