HHsearch alignment for GI: 254780693 and conserved domain: PRK11337

>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional.
Probab=92.00  E-value=0.47  Score=26.69  Aligned_cols=18  Identities=6%  Similarity=0.026  Sum_probs=11.1

Q ss_pred             HHHHHHHHHCCCCEEEEE
Q ss_conf             999999985837858998
Q gi|254780693|r   20 RLHLIQNRIKARNFALYT   37 (235)
Q Consensus        20 ~l~~l~~~~~~~~f~~~~   37 (235)
T Consensus        63 TVvRf~kkLGf~Gf~efK   80 (293)
T PRK11337         63 MIVKVAKLLGFSGFRNLR   80 (293)
T ss_pred             HHHHHHHHHCCCCHHHHH
T ss_conf             999999995789789999