HHsearch alignment for GI: 254780693 and conserved domain: PRK11475

>PRK11475 DNA-binding transcriptional activator BglJ; Provisional.
Probab=99.50  E-value=2.7e-13  Score=113.95  Aligned_cols=62  Identities=24%  Similarity=0.286  Sum_probs=57.4

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             74449989999999998799978999994999889999999999980799789999999976
Q gi|254780693|r  170 AARNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRF  231 (235)
Q Consensus       170 ~~~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~  231 (235)
T Consensus       131 ~~~~Lt~rE~eVl~l~a~G~s~~eIA~~L~~S~kTv~thr~~~m~KLgv~s~a~Li~~a~~~  192 (205)
T PRK11475        131 QSRMLSPTEREILRFMSRGYSMPQIAEQLERNIKTIRAHKFNVMSKLGVSSDAGLLDAADIL  192 (205)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             67889858999999997699999999997888889999999999982999879999999999