HHsearch alignment for GI: 254780693 and conserved domain: PRK13558

>PRK13558 bacterio-opsin activator; Provisional.
Probab=97.14  E-value=0.00088  Score=46.14  Aligned_cols=44  Identities=30%  Similarity=0.345  Sum_probs=40.6

Q ss_pred             CCCHHHHHHHHHHH--------CCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             49989999999998--------799978999994999889999999999980
Q gi|254780693|r  173 NLTERETSCLQLAG--------DGYTSEEIAEKLGLSVHTVNAYLGSATVKL  216 (235)
Q Consensus       173 ~LT~RE~evL~l~a--------~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  216 (235)
T Consensus       616 ~LTDRQ~eaLqtAY~sGyFEwPR~sTGeElAesLgIS~pTfhqHLRaaerKL  667 (674)
T PRK13558        616 DLTDRQLTALQKAYVSGYFEWPRRAEGKQLAESMDIVPSTYHQHLQAAKQKL  667 (674)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             6049899999999864757788778789999870988388999999999999