HHsearch alignment for GI: 254780693 and conserved domain: PRK13719

>PRK13719 conjugal transfer transcriptional regulator TraJ; Provisional.
Probab=94.73  E-value=0.04  Score=34.34  Aligned_cols=60  Identities=13%  Similarity=0.093  Sum_probs=54.7

Q ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf             989999999998799978999994999889999999999980799789999999976999
Q gi|254780693|r  175 TERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGYI  234 (235)
Q Consensus       175 T~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~Gli  234 (235)
T Consensus       147 ~~~~~~vf~~Ys~G~SH~~ia~~L~It~~sSkn~~s~i~k~~gissrde~l~~l~~s~~~  206 (220)
T PRK13719        147 TSIQYDVFILYSFGFSHNSIASLLNITNGSSKNKISEILKFFGISSRDELLIILHTSEMI  206 (220)
T ss_pred             EEEEEEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf             200466898875242468899884741354077999999972988599999999997689