HHsearch alignment for GI: 254780693 and conserved domain: cd00090
>cd00090 HTH_ARSR Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.
Probab=95.17 E-value=0.059 Score=33.12 Aligned_cols=41 Identities=37% Similarity=0.420 Sum_probs=36.2
Q ss_pred CC-HHHHHHHHHHHCC-CCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99-8999999999879-99789999949998899999999999
Q gi|254780693|r 174 LT-ERETSCLQLAGDG-YTSEEIAEKLGLSVHTVNAYLGSATV 214 (235)
Q Consensus 174 LT-~RE~evL~l~a~G-~t~~eIA~~L~iS~~TV~~hl~~i~~ 214 (235)
T Consensus 4 l~~~~r~~Il~~L~~~~~~~~eia~~l~is~~~vs~hL~~L~~ 46 (78)
T cd00090 4 LSDPTRLRILRLLLEGPLTVSELAERLGLSQSTVSRHLKKLEE 46 (78)
T ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 2799999999999848906999987778487899999999998