HHsearch alignment for GI: 254780693 and conserved domain: pfam01726
>pfam01726 LexA_DNA_bind LexA DNA binding domain. This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins. The aligned region contains a variant form of the helix-turn-helix DNA binding motif. This domain is found associated with pfam00717 the auto-proteolytic domain of LexA EC:3.4.21.88.
Probab=96.30 E-value=0.0098 Score=38.65 Aligned_cols=44 Identities=36% Similarity=0.530 Sum_probs=38.0
Q ss_pred CCCCHHHHHHHHHHHC-----CC--CHHHHHHHHCC-CHHHHHHHHHHHHHH
Q ss_conf 4499899999999987-----99--97899999499-988999999999998
Q gi|254780693|r 172 RNLTERETSCLQLAGD-----GY--TSEEIAEKLGL-SVHTVNAYLGSATVK 215 (235)
Q Consensus 172 ~~LT~RE~evL~l~a~-----G~--t~~eIA~~L~i-S~~TV~~hl~~i~~K 215 (235)
T Consensus 2 ~~LT~rQ~~il~~I~~~~~~~G~~Pt~rEI~~~~g~~S~s~v~~~l~~Le~k 53 (65)
T pfam01726 2 KPLTERQREVLDFIKASIEETGYPPSRREIAQALGLRSPNAAEEHLKALERK 53 (65)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 6337999999999999999828898799999993899809999999999998