HHsearch alignment for GI: 254780693 and conserved domain: pfam04967

>pfam04967 HTH_10 HTH DNA binding domain.
Probab=97.35  E-value=0.00064  Score=47.12  Aligned_cols=43  Identities=37%  Similarity=0.465  Sum_probs=39.7

Q ss_pred             CCHHHHHHHHHHH--------CCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             9989999999998--------799978999994999889999999999980
Q gi|254780693|r  174 LTERETSCLQLAG--------DGYTSEEIAEKLGLSVHTVNAYLGSATVKL  216 (235)
Q Consensus       174 LT~RE~evL~l~a--------~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  216 (235)
T Consensus         1 LT~rQ~evl~~A~~~GYfd~PR~~~l~elA~~lgis~sT~~~hLr~ae~ki   51 (53)
T pfam04967         1 LTDRQREILRLAYKMGYFDYPRRVTLKDLAKELGISKSTLSEHLRRAESKL   51 (53)
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             988999999999986897788768899999996989999999999999987