HHsearch alignment for GI: 254780693 and conserved domain: pfam07638

>pfam07638 Sigma70_ECF ECF sigma factor. These proteins are probably RNA polymerase sigma factors belonging to the extra-cytoplasmic function (ECF) subfamily and show sequence similarity to pfam04542 and pfam04545.

Probab=98.16  E-value=5.4e-06  Score=61.91  Aligned_cols=45  Identities=33%  Similarity=0.443  Sum_probs=42.0

Q ss_pred             CCCHHHHHHHHHHH-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             49989999999998-7999789999949998899999999999807
Q gi|254780693|r  173 NLTERETSCLQLAG-DGYTSEEIAEKLGLSVHTVNAYLGSATVKLD  217 (235)
Q Consensus       173 ~LT~RE~evL~l~a-~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  217 (235)
T Consensus       135 ~Lpp~~r~v~~L~~~eglS~~EIAe~Lgis~~TVk~rl~~Ar~~Lr  180 (185)
T pfam07638       135 SLSPRQARLVELRFFAGLSNDEIAERLGVSERTVERNWALARAWLH  180 (185)
T ss_pred             CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             4899888898889975999999999979699899999999999999