HHsearch alignment for GI: 254780693 and conserved domain: smart00347
>smart00347 HTH_MARR helix_turn_helix multiple antibiotic resistance protein.
Probab=91.56 E-value=0.55 Score=26.19 Aligned_cols=45 Identities=27% Similarity=0.284 Sum_probs=38.8
Q ss_pred CCCCCHHHHHHHHHHH--CCCCHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 4449989999999998--79997899999499988999999999998
Q gi|254780693|r 171 ARNLTERETSCLQLAG--DGYTSEEIAEKLGLSVHTVNAYLGSATVK 215 (235)
Q Consensus 171 ~~~LT~RE~evL~l~a--~G~t~~eIA~~L~iS~~TV~~hl~~i~~K 215 (235)
T Consensus 5 ~~glt~~q~~vL~~l~~~~~~t~~~la~~l~~~~~~vs~~v~~L~~~ 51 (101)
T smart00347 5 PLGLTPTQFLVLRILYEEGPLSVSELAKRLGVSPSTVTRVLDRLEKK 51 (101)
T ss_pred HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCC
T ss_conf 13949999999999997699799999999896887999999999458