HHsearch alignment for GI: 254780693 and conserved domain: smart00421

>smart00421 HTH_LUXR helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon
Probab=99.52  E-value=3.2e-14  Score=120.57  Aligned_cols=57  Identities=42%  Similarity=0.546  Sum_probs=55.2

Q ss_pred             CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             449989999999998799978999994999889999999999980799789999999
Q gi|254780693|r  172 RNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKA  228 (235)
Q Consensus       172 ~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A  228 (235)
T Consensus         2 ~~LT~rE~~il~~l~~G~s~~eIA~~L~is~~TV~~~~~~i~~Kl~v~~r~elv~~A   58 (58)
T smart00421        2 ASLTPREREVLRLLAEGLTNKEIAERLGISEKTVKTHLSNIMRKLGVRSRTQAVRLA   58 (58)
T ss_pred             CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHC
T ss_conf             761899999999998179999999898978989999999999984899999999549