HHsearch results for GI: 254780693 and protein with PDBid: 1jko_C
>1jko_C HIN recombinase, DNA-invertase HIN; water-mediated recognition, protein-DNA complex, A10G mutant, DNA binding protein/DNA complex; 2.24A {Synthetic} SCOP: a.4.1.2 PDB: 1ijw_C* 1jj6_C* 1jj8_C* 1hcr_A 1jkp_C 1jkq_C 1jkr_C
Probab=94.95 E-value=0.019 Score=35.03 Aligned_cols=38 Identities=24% Similarity=0.433 Sum_probs=32.8
Q ss_pred CCCCHHH-HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH
Q ss_conf 4499899-9999999879997899999499988999999
Q gi|254780693|r 172 RNLTERE-TSCLQLAGDGYTSEEIAEKLGLSVHTVNAYL 209 (235)
Q Consensus 172 ~~LT~RE-~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl 209 (235)
..||+.+ .++.++++.|.|..+||..+|||..|+..|+
T Consensus 4 ~kLt~~q~~~a~~l~~~G~s~~~iA~~~gVsr~TlYryl 42 (52)
T 1jko_C 4 RAINKHEQEQISRLLEKGHPRQQLAIIFGIGVSTLYRYF 42 (52)
T ss_dssp CSSCTTHHHHHHHHHHTTCCHHHHHHTTSCCHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHC
T ss_conf 879999999999999978989999999797999999985