HHsearch results for GI: 254780693 and protein with PDBid: 1l0o_C

>1l0o_C Sigma factor; bergerat fold, helix-turn-helix, protein binding; HET: ADP; 2.90A {Geobacillus stearothermophilus} SCOP: a.4.13.2

Probab=96.61  E-value=0.00026  Score=48.30  Aligned_cols=45  Identities=24%  Similarity=0.265  Sum_probs=42.2

Q ss_pred             CCCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             4499899999999-98799978999994999889999999999980
Q gi|254780693|r  172 RNLTERETSCLQL-AGDGYTSEEIAEKLGLSVHTVNAYLGSATVKL  216 (235)
Q Consensus       172 ~~LT~RE~evL~l-~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  216 (235)
                      ..|++||++|+.+ .-.|+|-+|||..||||+.+|....+++.+||
T Consensus       197 ~~L~~~er~Vi~l~y~~~~t~~EIA~~lgiS~~rV~qi~~~Al~kL  242 (243)
T 1l0o_C          197 EELDERERLIVYLRYYKDQTQSEVASRLGISQVQMSRLEKKILQHI  242 (243)
T ss_dssp             ----------------------------------------------
T ss_pred             HHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             8599999999999806999899999998949999999999999862