HHsearch results for GI: 254780693 and protein with PDBid: 1okr_A

>1okr_A MECI, methicillin resistance regulatory protein MECI; bacterial antibiotic resistance, MECI protein, transcriptional regulatory element; 2.4A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1sax_A 1sd7_A 2d45_A 1sd6_A

Probab=92.99  E-value=0.2  Score=27.81  Aligned_cols=45  Identities=13%  Similarity=0.147  Sum_probs=37.1

Q ss_pred             CCCCHHHHHHHHHH--HCCCCHHHHHHHH----CCCHHHHHHHHHHHHHHC
Q ss_conf             44998999999999--8799978999994----999889999999999980
Q gi|254780693|r  172 RNLTERETSCLQLA--GDGYTSEEIAEKL----GLSVHTVNAYLGSATVKL  216 (235)
Q Consensus       172 ~~LT~RE~evL~l~--a~G~t~~eIA~~L----~iS~~TV~~hl~~i~~KL  216 (235)
                      ..||+.|.+|+..+  ..+.|.+||+..|    +++..||..-++++.+|=
T Consensus         6 ~~lt~~E~~VM~~LW~~~~~t~~ei~~~l~~~~~~~~~Tv~t~L~RL~~KG   56 (123)
T 1okr_A            6 YEISSAEWEVMNIIWMKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKG   56 (123)
T ss_dssp             CCCCHHHHHHHHHHHHHSSEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
T ss_conf             998999999999998379979999999975123875424999999999889