HHsearch results for GI: 254780693 and protein with PDBid: 1p4w_A

>1p4w_A RCSB; solution structure, DNA binding domain, DNA binding protein; NMR {Erwinia amylovora} SCOP: a.4.6.2

Probab=99.64  E-value=1.1e-15  Score=129.41  Aligned_cols=65  Identities=28%  Similarity=0.382  Sum_probs=62.4

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf             74449989999999998799978999994999889999999999980799789999999976999
Q gi|254780693|r  170 AARNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGYI  234 (235)
Q Consensus       170 ~~~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~Gli  234 (235)
                      ....||+||.+||.|+++|+|++|||..|+||++||++|+++|++|||++||+|+|.+|.+.|||
T Consensus        31 ~~~~LT~rE~~vl~ll~~G~s~~eIA~~l~iS~~TV~~~~~~i~~KL~v~~~~elv~~a~~~Gli   95 (99)
T 1p4w_A           31 GDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVDNDIALLNYLSSVSMT   95 (99)
T ss_dssp             SSSSCCHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHTCS
T ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
T ss_conf             88998999999999999389999997772998999999999999980999999999999996899