HHsearch results for GI: 254780693 and protein with PDBid: 1r1t_A
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=92.75 E-value=0.23 Score=27.36 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=32.2
Q ss_pred HHHHHHHHHCC-CCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 99999999879-99789999949998899999999999
Q gi|254780693|r 178 ETSCLQLAGDG-YTSEEIAEKLGLSVHTVNAYLGSATV 214 (235)
Q Consensus 178 E~evL~l~a~G-~t~~eIA~~L~iS~~TV~~hl~~i~~ 214 (235)
=.+++.++++| ++..||+..+|+|..||-.|++...+
T Consensus 48 Rl~Il~~L~~~~~~v~ela~~l~~s~stvS~HL~~L~~ 85 (122)
T 1r1t_A 48 RLRLLSLLARSELCVGDLAQAIGVSESAVSHQLRSLRN 85 (122)
T ss_dssp HHHHHHHHTTCCBCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99999999829976999999989198889999999998