HHsearch results for GI: 254780693 and protein with PDBid: 2rnj_A

>2rnj_A Response regulator protein VRAR; HTH LUXR-type domain, DNA binding domain, activator, antibiotic resistance, cytoplasm, DNA-binding; NMR {Staphylococcus aureus}
Probab=99.65  E-value=3.2e-16  Score=133.23  Aligned_cols=65  Identities=32%  Similarity=0.440  Sum_probs=62.5

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
Q ss_conf             74449989999999998799978999994999889999999999980799789999999976999
Q gi|254780693|r  170 AARNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGYI  234 (235)
Q Consensus       170 ~~~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~Gli  234 (235)
                      ..+.||+||+|||.|+++|+|++|||.+|+||++||++|+++|++||||.||+|+|.+|.+.|||
T Consensus        26 ~~~~LT~rE~evl~ll~~G~s~~eIA~~L~iS~~TV~~~~~~i~~Kl~v~~r~elv~~a~~~gli   90 (91)
T 2rnj_A           26 LYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLI   90 (91)
T ss_dssp             TGGGCCSHHHHHHHHHHTTCCTTHHHHHHTCCHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHTCC
T ss_pred             HHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
T ss_conf             42617999999999999289999999997889999999999999990999999999999994899