HHsearch results for GI: 254780693 and protein with PDBid: 3klo_A

>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*

Probab=99.66  E-value=1.1e-16  Score=136.57  Aligned_cols=63  Identities=38%  Similarity=0.429  Sum_probs=60.2

Q ss_pred             CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCC
Q ss_conf             449989999999998799978999994999889999999999980799789999999976-999
Q gi|254780693|r  172 RNLTERETSCLQLAGDGYTSEEIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRF-GYI  234 (235)
Q Consensus       172 ~~LT~RE~evL~l~a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg~~nR~qava~A~~~-Gli  234 (235)
                      ..||+||+|||+++++|+||+|||.+|+||++||++|+++|++||||+||+|+|.+|.+. |+.
T Consensus       158 ~~LT~RE~eVL~ll~~G~snkeIA~~L~iS~~TVk~h~~~i~~KLgv~nr~el~~~A~~~~g~~  221 (225)
T 3klo_A          158 AKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIE  221 (225)
T ss_dssp             HTSCHHHHHHHHHHTTTCCHHHHHHHTTCCHHHHHHHHHHHTTTSCCSSHHHHHHHHHHHCCC-
T ss_pred             HHHCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
T ss_conf             4422256543035533997999999978899999999999999868999999999999907977