PSIBLAST alignment of GI: 254780693 and protein with PDB id: 1l3l

>gi|21730643|pdb|1L3L|A Chain A, Crystal Structure Of A Bacterial Quorum-Sensing Transcription Factor Complexed With Pheromone And Dna Length = 234
>gi|21730644|pdb|1L3L|B Chain B, Crystal Structure Of A Bacterial Quorum-Sensing Transcription Factor Complexed With Pheromone And Dna Length = 234
 Score =  114 bits (286), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 68/222 (30%), Gaps = 12/222 (5%)

Query: 17  LSPRLHLIQNRIKARNFALYTINSALDFPRRQQLICELHNYDLDSGDIPNILIETYGDDF 76
           L   L  I +      +A   I          + I  + NY                D  
Sbjct: 21  LKTGLADIADHFGFTGYAYLHIQH--------RHITAVTNYHRQWQSTYFDKKFEALDPV 72

Query: 77  LFHFNSGLLPIIWQSIQEETVIESSGQLSVRLEGGLLPFAGIAFPVRLGFHKNGYVIFTS 136
           +    S      W    E   +    +            +GI  P++            S
Sbjct: 73  VKRARSRKHIFTWSGEHERPTLSKDERAFYDHASDFGIRSGITIPIKTANGFXSXFTXAS 132

Query: 137 EFLMLANEVIIEAHGACYQVITDFLELFKKRSSAARN----LTERETSCLQLAGDGYTSE 192
           +  ++  +  I+A  A   +      +   R++        L  +E + L+    G T E
Sbjct: 133 DKPVIDLDREIDAVAAAATIGQIHARISFLRTTPTAEDAAWLDPKEATYLRWIAVGKTXE 192

Query: 193 EIAEKLGLSVHTVNAYLGSATVKLDAVNRIQAIAKAIRFGYI 234
           EIA+  G+  ++V   L  A  + D  ++    A AIR   I
Sbjct: 193 EIADVEGVKYNSVRVKLREAXKRFDVRSKAHLTALAIRRKLI 234