HHsearch alignment for GI: 254780694 and conserved domain: COG3398
>COG3398 Uncharacterized protein conserved in archaea [Function unknown].
Probab=93.26 E-value=0.16 Score=28.60 Aligned_cols=35 Identities=26% Similarity=0.139 Sum_probs=29.0
Q ss_pred HHHHHHHHCC--CCHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 9999999859--9979999994999889999999999
Q gi|254780694|r 191 VECLTWISEG--KTSDEIAVILGISRNTVNNYIASIM 225 (246)
Q Consensus 191 ~eVl~lia~G--~t~~eIA~~L~iS~~TV~~hl~~i~ 225 (246)
T Consensus 177 k~I~~eiq~~~~~t~~~ia~~l~ls~aTV~~~lk~l~ 213 (240)
T COG3398 177 KAIIYEIQENKCNTNLLIAYELNLSVATVAYHLKKLE 213 (240)
T ss_pred HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 8999998628741599998870865999999999898