HHsearch alignment for GI: 254780694 and conserved domain: COG3415

>COG3415 Transposase and inactivated derivatives [DNA replication, recombination, and repair].

Probab=94.59  E-value=0.077  Score=30.68  Aligned_cols=40  Identities=25%  Similarity=0.220  Sum_probs=29.9

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             8977999999998599979999994999889999999999
Q gi|254780694|r  186 LTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIM  225 (246)
Q Consensus       186 LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~  225 (246)
T Consensus         7 ~~~R~~~~~~~~~~G~S~re~Ak~~gvs~sTvy~wv~r~~   46 (138)
T COG3415           7 NDLRERVVDAVVGEGLSCREAAKRFGVSISTVYRWVRRYR   46 (138)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHC
T ss_conf             8999999999997685499999996922999999998733