HHsearch alignment for GI: 254780694 and conserved domain: PRK00118
>PRK00118 putative DNA-binding protein; Validated.
Probab=94.64 E-value=0.11 Score=29.59 Aligned_cols=44 Identities=20% Similarity=0.207 Sum_probs=39.2
Q ss_pred CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 8897799999999-8599979999994999889999999999980
Q gi|254780694|r 185 ELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKT 228 (246)
Q Consensus 185 ~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL 228 (246)
T Consensus 17 LLT~kQ~~~~~lyy~~DlSl~EIAe~~~iSRQaV~D~ikr~~~~L 61 (105)
T PRK00118 17 LLTEKQRNYMELYYLDDYSLGEIAEEFNVSRQAVYDNIKRTEKLL 61 (105)
T ss_pred HCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 755999999999988549999998996985999999999999999