HHsearch alignment for GI: 254780694 and conserved domain: PRK07598

>PRK07598 RNA polymerase sigma factor SigC; Validated.
Probab=96.58  E-value=0.011  Score=36.10  Aligned_cols=54  Identities=26%  Similarity=0.309  Sum_probs=47.4

Q ss_pred             CCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             8897799999999-----85999799999949998899999999999807998899999
Q gi|254780694|r  185 ELTGREVECLTWI-----SEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIA  238 (246)
Q Consensus       185 ~LT~RE~eVl~li-----a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~  238 (246)
T Consensus       345 ~L~~REr~IL~lRfGL~dg~~~TL~EIG~~lgISRERVRQIE~kAL~KLR~p~r~~~Lr  403 (410)
T PRK07598        345 DLTSRERDVIRMRFGLADGRTYSLAEIGRALDLSRERVRQIEAKALQKLRQPKRRNRIR  403 (410)
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             69999999999964899979668999998979699999999999999967737789999