HHsearch alignment for GI: 254780694 and conserved domain: PRK07921

>PRK07921 RNA polymerase sigma factor SigB; Reviewed.

Probab=96.37  E-value=0.013  Score=35.72  Aligned_cols=52  Identities=25%  Similarity=0.357  Sum_probs=45.5

Q ss_pred             CCCHHHHHHHHHHH-----CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             88977999999998-----59997999999499988999999999998079988999
Q gi|254780694|r  185 ELTGREVECLTWIS-----EGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGA  236 (246)
Q Consensus       185 ~LT~RE~eVl~lia-----~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~ea  236 (246)
T Consensus       258 ~L~eREr~IL~~RfGl~~~~~~TL~EIg~~lgvSrERVRQIE~~AL~KLR~~~~~~~  314 (320)
T PRK07921        258 TLDEREQQVIRLRFGLDDGQPRTLDQIGKLFGLSRERVRQIEREVMSKLRHGERADR  314 (320)
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
T ss_conf             599999999999748999897479999989796999999999999999707288888