HHsearch alignment for GI: 254780694 and conserved domain: PRK08241

>PRK08241 RNA polymerase factor sigma-70; Validated.
Probab=96.33  E-value=0.0057  Score=37.94  Aligned_cols=46  Identities=26%  Similarity=0.245  Sum_probs=41.7

Q ss_pred             CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf             8897799999999-859997999999499988999999999998079
Q gi|254780694|r  185 ELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKTAT  230 (246)
Q Consensus       185 ~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv  230 (246)
T Consensus       156 ~Lpp~QRavlvLRdV~g~s~~EiAe~Lg~S~aAVks~L~RARa~L~~  202 (341)
T PRK08241        156 HLPPRQRAVLLLRDVLGWSAAEVAEALGTSTAAVNSALQRARATLAE  202 (341)
T ss_pred             HCCHHHHEEEEHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             39997902001297529988999999789999999999999999986