HHsearch alignment for GI: 254780694 and conserved domain: PRK08295

>PRK08295 RNA polymerase factor sigma-70; Validated.
Probab=98.14  E-value=6.3e-06  Score=56.91  Aligned_cols=45  Identities=29%  Similarity=0.332  Sum_probs=43.0

Q ss_pred             CCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             889779999999985999799999949998899999999999807
Q gi|254780694|r  185 ELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       185 ~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       155 ~l~~~e~~V~~~~~eg~s~~EIA~~l~is~~tV~~~l~RarkkLr  199 (209)
T PRK08295        155 LLSDLEKEVLELYLDGKSYQEIAEELNRHVKSIDNALQRVKRKLE  199 (209)
T ss_pred             CCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             691899999999986999999999989299999999999999999