HHsearch alignment for GI: 254780694 and conserved domain: PRK08301

>PRK08301 sporulation sigma factor SigE; Reviewed.

Probab=97.07  E-value=0.0016  Score=41.52  Aligned_cols=46  Identities=28%  Similarity=0.408  Sum_probs=42.2

Q ss_pred             CCCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             88897799999999-----85999799999949998899999999999807
Q gi|254780694|r  184 FELTGREVECLTWI-----SEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       184 ~~LT~RE~eVl~li-----a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       182 ~~L~eREr~Ii~lRfGL~~~~~~Tl~EIa~~lgISrerVrQIe~~AL~KLR  232 (239)
T PRK08301        182 KKLNDREKQIMELRFGLAGGEEKTQKEVADMLGISQSYISRLEKRIIKRLK  232 (239)
T ss_pred             HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             648999999999995788998406999999989789999999999999999