HHsearch alignment for GI: 254780694 and conserved domain: PRK09483

>PRK09483 response regulator; Provisional.
Probab=99.92  E-value=6.4e-24  Score=172.40  Aligned_cols=207  Identities=15%  Similarity=0.127  Sum_probs=130.2

Q ss_pred             EEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCHHHHH
Q ss_conf             00221445888876553023213799997327999999999999987193023000266631112321000689589999
Q gi|254780694|r    9 NIVLNREDEQRTSFVSHLPTRSDLLARMIPLDCTVSWTMRMYALTEYVGASHFLLVRWDLFQEQKLDSIVSSDWPFDLVR   88 (246)
Q Consensus         9 ~~~l~r~d~~r~~~v~~l~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~   88 (246)
T Consensus         3 ~VlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~~~l~~~~~----~~p-----------DvvllDl~lp~~~Gl~~~~   67 (216)
T PRK09483          3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT----NAV-----------DVVLMDMNMPGIGGLEATR   67 (216)
T ss_pred             EEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH----CCC-----------CEEEECCCCCCCCCHHHHH
T ss_conf             8999849999999999999748995899998999999999985----599-----------9999868898987523778


Q ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf             99966984517389999852324430325433332144571475033736899999997178754698999999999999
Q gi|254780694|r   89 CMALSEKDKYYNVLQRPTELFCPVFHTLPENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLLAAY  168 (246)
Q Consensus        89 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (246)
T Consensus        68 ~i~~~-----~p~~~v---ivls~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~G~~~~~~~~~~~~~~----  135 (216)
T PRK09483         68 KILRS-----TPDVKI---IMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVHSGQRYIASDIAQQMAL----  135 (216)
T ss_pred             HHHHH-----CCCCCE---EEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH----
T ss_conf             88740-----899857---863056632889999974887899479999999999999985997069899999987----


Q ss_pred             HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf             997542014677988888977999999998599979999994999889999999999980799889999999975898
Q gi|254780694|r  169 QANMFKSYDVHWGKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNIV  246 (246)
Q Consensus       169 ~~~~~~~~~~~~~~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~Gli  246 (246)
T Consensus       136 --~~~~--~~~~~~~~~LT~RE~eVl~ll~~G~snkeIA~~L~iS~~TV~~h~~~i~~KL~v~~r~el~~~A~~~gli  209 (216)
T PRK09483        136 --SQFE--PATENPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNISGDVELTHLAIRHGLL  209 (216)
T ss_pred             --HCCC--CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf             --3237--6545654568999999999998799999999996989999999999999980999999999999995991