HHsearch alignment for GI: 254780694 and conserved domain: PRK09483
>PRK09483 response regulator; Provisional.
Probab=99.92 E-value=6.4e-24 Score=172.40 Aligned_cols=207 Identities=15% Similarity=0.127 Sum_probs=130.2
Q ss_pred EEEECCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEECCCCCHHHHH
Q ss_conf 00221445888876553023213799997327999999999999987193023000266631112321000689589999
Q gi|254780694|r 9 NIVLNREDEQRTSFVSHLPTRSDLLARMIPLDCTVSWTMRMYALTEYVGASHFLLVRWDLFQEQKLDSIVSSDWPFDLVR 88 (246)
Q Consensus 9 ~~~l~r~d~~r~~~v~~l~~~~d~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 88 (246)
T Consensus 3 ~VlIvDDh~l~r~gl~~~L~~~~~~~vv~~a~~~~~~l~~~~~----~~p-----------DvvllDl~lp~~~Gl~~~~ 67 (216)
T PRK09483 3 NVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRT----NAV-----------DVVLMDMNMPGIGGLEATR 67 (216)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH----CCC-----------CEEEECCCCCCCCCHHHHH
T ss_conf 8999849999999999999748995899998999999999985----599-----------9999868898987523778
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99966984517389999852324430325433332144571475033736899999997178754698999999999999
Q gi|254780694|r 89 CMALSEKDKYYNVLQRPTELFCPVFHTLPENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLLAAY 168 (246)
Q Consensus 89 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (246)
T Consensus 68 ~i~~~-----~p~~~v---ivls~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~G~~~~~~~~~~~~~~---- 135 (216)
T PRK09483 68 KILRS-----TPDVKI---IMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVHSGQRYIASDIAQQMAL---- 135 (216)
T ss_pred HHHHH-----CCCCCE---EEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH----
T ss_conf 88740-----899857---863056632889999974887899479999999999999985997069899999987----
Q ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 997542014677988888977999999998599979999994999889999999999980799889999999975898
Q gi|254780694|r 169 QANMFKSYDVHWGKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNIV 246 (246)
Q Consensus 169 ~~~~~~~~~~~~~~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~Gli 246 (246)
T Consensus 136 --~~~~--~~~~~~~~~LT~RE~eVl~ll~~G~snkeIA~~L~iS~~TV~~h~~~i~~KL~v~~r~el~~~A~~~gli 209 (216)
T PRK09483 136 --SQFE--PATENPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNISGDVELTHLAIRHGLL 209 (216)
T ss_pred --HCCC--CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf --3237--6545654568999999999998799999999996989999999999999980999999999999995991