HHsearch alignment for GI: 254780694 and conserved domain: PRK09640

>PRK09640 RNA polymerase sigma factor SigX; Reviewed.

Probab=97.97  E-value=2.1e-05  Score=53.52  Aligned_cols=45  Identities=16%  Similarity=0.102  Sum_probs=41.9

Q ss_pred             CCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             889779999999-985999799999949998899999999999807
Q gi|254780694|r  185 ELTGREVECLTW-ISEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       185 ~LT~RE~eVl~l-ia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       134 ~L~~~~R~vl~L~~~~~ls~~EIA~~l~is~~tVksrl~RAr~~Lr  179 (188)
T PRK09640        134 HVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLR  179 (188)
T ss_pred             HCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             4899999999999992999999999989299999999999999999