HHsearch alignment for GI: 254780694 and conserved domain: PRK10710
>PRK10710 DNA-binding transcriptional regulator BaeR; Provisional.
Probab=97.30 E-value=0.00048 Score=44.85 Aligned_cols=113 Identities=12% Similarity=0.084 Sum_probs=69.7
Q ss_pred HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 54333321445714750337368999999971787546989999999999999975420146779888889779999999
Q gi|254780694|r 117 PENITPPAGMDNRYCSLTFDVARIRIGLMLLFPKGRIILRDRLWEIGLLAAYQANMFKSYDVHWGKDFELTGREVECLTW 196 (246)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LT~RE~eVl~l 196 (246)
T Consensus 94 ~~~~~al~~GAddYl~KPf~~~eLlari~~~lrr~~~~~~~~~~~--~~~~l~ld~~~~~~~~~~~~i~LT~~E~~lL~~ 171 (240)
T PRK10710 94 IDRLLGLEIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQD--AESPLIIDESRFQASWRGKMLDLTPAEFRLLKT 171 (240)
T ss_pred HHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCE--EECCEEEECCCEEEEECCEEEECCHHHHHHHHH
T ss_conf 999999986998760077653899999999984523555644300--004789985631999899998558999999999
Q ss_pred HHCC----CCHHHHHHHHC-----CCHHHHHHHHHHHHHHHCCC
Q ss_conf 9859----99799999949-----99889999999999980799
Q gi|254780694|r 197 ISEG----KTSDEIAVILG-----ISRNTVNNYIASIMRKTATK 231 (246)
Q Consensus 197 ia~G----~t~~eIA~~L~-----iS~~TV~~hl~~i~~KLgv~ 231 (246)
T Consensus 172 L~~~~g~vvSre~L~~~vw~~~~~~~~rsid~~I~rLRkKl~~~ 215 (240)
T PRK10710 172 LSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESL 215 (240)
T ss_pred HHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99779973989999999628888888465999999999960106