HHsearch alignment for GI: 254780694 and conserved domain: PRK12512

>PRK12512 RNA polymerase sigma factor; Provisional.
Probab=98.15  E-value=6.4e-06  Score=56.89  Aligned_cols=47  Identities=21%  Similarity=0.188  Sum_probs=42.9

Q ss_pred             CCCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf             8889779999999-9859997999999499988999999999998079
Q gi|254780694|r  184 FELTGREVECLTW-ISEGKTSDEIAVILGISRNTVNNYIASIMRKTAT  230 (246)
Q Consensus       184 ~~LT~RE~eVl~l-ia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv  230 (246)
T Consensus       130 ~~Lp~~~R~vi~L~~~~g~s~~EIA~~lgis~~tVk~~l~RA~~~Lr~  177 (184)
T PRK12512        130 ETLPPRQRDVVQSIAVEGASIKETAAKLSMSEGAVRVALHRGLAALAA  177 (184)
T ss_pred             HCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             689999999999998559799999999891999999999999999999