HHsearch alignment for GI: 254780694 and conserved domain: TIGR02233
>TIGR02233 Myxo_sigma_rel Myxococcus probable DNA-binding regulatory protein.
Probab=93.26 E-value=0.16 Score=28.63 Aligned_cols=56 Identities=25% Similarity=0.331 Sum_probs=50.7
Q ss_pred CCCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 8889779999999-9859997999999499988999999999998079988999999
Q gi|254780694|r 184 FELTGREVECLTW-ISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAY 239 (246)
Q Consensus 184 ~~LT~RE~eVl~l-ia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~ 239 (246)
T Consensus 23 a~L~~~eR~lLRLH~~~gLsldR~~~lY~~hrStvaR~v~~are~Ll~~Tr~~LaeR 79 (106)
T TIGR02233 23 AALSERERTLLRLHHVEGLSLDRLGTLYGVHRSTVARWVAGARELLLERTRQELAER 79 (106)
T ss_pred HCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 528963335666776236558999988478861699999999999999989987674