HHsearch alignment for GI: 254780694 and conserved domain: pfam01022

>pfam01022 HTH_5 Bacterial regulatory protein, arsR family. Members of this family contains a DNA binding 'helix-turn-helix' motif. This family includes other proteins which are not included in the Prosite definition.

Probab=95.18  E-value=0.059  Score=31.42  Aligned_cols=39  Identities=31%  Similarity=0.420  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHCC-CCHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             7799999999859-99799999949998899999999999
Q gi|254780694|r  188 GREVECLTWISEG-KTSDEIAVILGISRNTVNNYIASIMR  226 (246)
Q Consensus       188 ~RE~eVl~lia~G-~t~~eIA~~L~iS~~TV~~hl~~i~~  226 (246)
T Consensus         2 p~Rl~Il~~L~~~~~~v~el~~~l~~sq~~vS~HL~~L~~   41 (47)
T pfam01022         2 PTRLKILYLLSEGELCVCELAEILGLSQSTVSHHLKKLRE   41 (47)
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             5899999999808996999999989588699999999989