HHsearch alignment for GI: 254780694 and conserved domain: pfam01726
>pfam01726 LexA_DNA_bind LexA DNA binding domain. This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins. The aligned region contains a variant form of the helix-turn-helix DNA binding motif. This domain is found associated with pfam00717 the auto-proteolytic domain of LexA EC:3.4.21.88.
Probab=96.74 E-value=0.0036 Score=39.20 Aligned_cols=43 Identities=37% Similarity=0.548 Sum_probs=38.1
Q ss_pred CCCHHHHHHHHHHHC-----C--CCHHHHHHHHCC-CHHHHHHHHHHHHHH
Q ss_conf 889779999999985-----9--997999999499-988999999999998
Q gi|254780694|r 185 ELTGREVECLTWISE-----G--KTSDEIAVILGI-SRNTVNNYIASIMRK 227 (246)
Q Consensus 185 ~LT~RE~eVl~lia~-----G--~t~~eIA~~L~i-S~~TV~~hl~~i~~K 227 (246)
T Consensus 3 ~LT~rQ~~il~~I~~~~~~~G~~Pt~rEI~~~~g~~S~s~v~~~l~~Le~k 53 (65)
T pfam01726 3 PLTERQREVLDFIKASIEETGYPPSRREIAQALGLRSPNAAEEHLKALERK 53 (65)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 337999999999999999828898799999993899809999999999998