HHsearch alignment for GI: 254780694 and conserved domain: pfam03428

>pfam03428 RP-C Replication protein C N-terminal domain. Replication protein C is involved in the early stages of viral DNA replication.

Probab=92.50  E-value=0.37  Score=26.28  Aligned_cols=43  Identities=14%  Similarity=0.309  Sum_probs=29.1

Q ss_pred             CCCCHHHHHHHHHHHC---------------CCCHHHHHHHH-CCCHHHHHHHHHHHHH
Q ss_conf             8889779999999985---------------99979999994-9998899999999999
Q gi|254780694|r  184 FELTGREVECLTWISE---------------GKTSDEIAVIL-GISRNTVNNYIASIMR  226 (246)
Q Consensus       184 ~~LT~RE~eVl~lia~---------------G~t~~eIA~~L-~iS~~TV~~hl~~i~~  226 (246)
T Consensus        39 lgl~~r~l~vL~aLlsf~~~~d~~~~~~~iVfpSN~~La~r~~G~s~~tlrrhla~Lve   97 (177)
T pfam03428        39 LGISDRALAVLNALLSFYPEDELTGEGRLIVFPSNAQLSLRAHGMSESTLRRHLAALVD   97 (177)
T ss_pred             CCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             59987699999999963988444889887350289999999849988999999999998