HHsearch alignment for GI: 254780694 and conserved domain: pfam07638

>pfam07638 Sigma70_ECF ECF sigma factor. These proteins are probably RNA polymerase sigma factors belonging to the extra-cytoplasmic function (ECF) subfamily and show sequence similarity to pfam04542 and pfam04545.

Probab=98.42  E-value=6.5e-07  Score=63.26  Aligned_cols=46  Identities=30%  Similarity=0.304  Sum_probs=42.3

Q ss_pred             CCCCHHHHHHHHHHH-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             888977999999998-5999799999949998899999999999807
Q gi|254780694|r  184 FELTGREVECLTWIS-EGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       184 ~~LT~RE~eVl~lia-~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
T Consensus       134 ~~Lpp~~r~v~~L~~~eglS~~EIAe~Lgis~~TVk~rl~~Ar~~Lr  180 (185)
T pfam07638       134 FSLSPRQARLVELRFFAGLSNDEIAERLGVSERTVERNWALARAWLH  180 (185)
T ss_pred             HCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             64899888898889975999999999979699899999999999999