HHsearch results for GI: 254780694 and protein with PDBid: 1gdt_A
>1gdt_A GD resolvase, protein (gamma delta resolvase); protein-DNA complex, double helix, overhanging base, DNA binding protein/DNA complex; 3.00A {Escherichia coli} SCOP: a.4.1.2 c.53.1.1 PDB: 1zr4_A 1zr2_A 2gm4_A 1res_A 1ret_A
Probab=95.89 E-value=0.049 Score=30.55 Aligned_cols=43 Identities=21% Similarity=0.328 Sum_probs=34.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 779888889779999999985999799999949998899999999
Q gi|254780694|r 179 HWGKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIAS 223 (246)
Q Consensus 179 ~~~~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~ 223 (246)
..++...+.+ .+|.++..+|+|..+||..|++|..||..+++.
T Consensus 139 ~~Gr~~~~~~--~~i~~l~~~g~s~~~Ia~~l~vs~sTv~R~l~~ 181 (183)
T 1gdt_A 139 VFGRKRKIDR--DAVLNMWQQGLGASHISKTMNIARSTVYKVINE 181 (183)
T ss_dssp CCSSCCCSCH--HHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCCCCCCCCH--HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHH
T ss_conf 6399998899--999999986999999999989399999999873