HHsearch results for GI: 254780694 and protein with PDBid: 1or7_A

>1or7_A Sigma-24, RNA polymerase sigma-E factor; regulation, DNA-binding, transmembrane, transcription; 2.00A {Escherichia coli} SCOP: a.4.13.2 a.177.1.1 PDB: 2h27_A

Probab=97.74  E-value=5.5e-05  Score=49.48  Aligned_cols=44  Identities=23%  Similarity=0.191  Sum_probs=41.2

Q ss_pred             CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             8897799999999-8599979999994999889999999999980
Q gi|254780694|r  185 ELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKT  228 (246)
Q Consensus       185 ~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  228 (246)
                      .|++.+++|+.+. -.|+|.+|||+.|++|++||+.++.++..||
T Consensus       140 ~L~~~~r~ii~l~y~~g~s~~eIA~~lg~s~~tV~~~l~ra~~~L  184 (194)
T 1or7_A          140 SLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAI  184 (194)
T ss_dssp             HSCHHHHHHHHHHHTTCCCHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             099999999999998398999999998939999999999999999