HHsearch results for GI: 254780694 and protein with PDBid: 1p4w_A

>1p4w_A RCSB; solution structure, DNA binding domain, DNA binding protein; NMR {Erwinia amylovora} SCOP: a.4.6.2
Probab=99.75  E-value=4.8e-18  Score=133.33  Aligned_cols=66  Identities=26%  Similarity=0.229  Sum_probs=62.9

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf             988888977999999998599979999994999889999999999980799889999999975898
Q gi|254780694|r  181 GKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNIV  246 (246)
Q Consensus       181 ~~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~Gli  246 (246)
                      .+...||+||.+|+.|+++|+|++|||+.|+||++||++|+++||+|||++||+|+|.+|.+.|||
T Consensus        30 ~~~~~LT~rE~~vl~ll~~G~s~~eIA~~l~iS~~TV~~~~~~i~~KL~v~~~~elv~~a~~~Gli   95 (99)
T 1p4w_A           30 YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVDNDIALLNYLSSVSMT   95 (99)
T ss_dssp             CSSSSCCHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHTCS
T ss_pred             CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
T ss_conf             888998999999999999389999997772998999999999999980999999999999996899