HHsearch results for GI: 254780694 and protein with PDBid: 1p4w_A
>1p4w_A RCSB; solution structure, DNA binding domain, DNA binding protein; NMR {Erwinia amylovora} SCOP: a.4.6.2
Probab=99.75 E-value=4.8e-18 Score=133.33 Aligned_cols=66 Identities=26% Similarity=0.229 Sum_probs=62.9
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 988888977999999998599979999994999889999999999980799889999999975898
Q gi|254780694|r 181 GKDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNIV 246 (246)
Q Consensus 181 ~~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~Gli 246 (246)
.+...||+||.+|+.|+++|+|++|||+.|+||++||++|+++||+|||++||+|+|.+|.+.|||
T Consensus 30 ~~~~~LT~rE~~vl~ll~~G~s~~eIA~~l~iS~~TV~~~~~~i~~KL~v~~~~elv~~a~~~Gli 95 (99)
T 1p4w_A 30 YGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVDNDIALLNYLSSVSMT 95 (99)
T ss_dssp CSSSSCCHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHTCS
T ss_pred CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
T ss_conf 888998999999999999389999997772998999999999999980999999999999996899