HHsearch results for GI: 254780694 and protein with PDBid: 1ys7_A

>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=97.17  E-value=0.00039  Score=44.03  Aligned_cols=109  Identities=16%  Similarity=0.175  Sum_probs=66.8

Q ss_pred             HHHHHCCCCCEEEEECCCHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf             3333214457147503373689999999717----875469899999999999999754201467798888897799999
Q gi|254780694|r  119 NITPPAGMDNRYCSLTFDVARIRIGLMLLFP----KGRIILRDRLWEIGLLAAYQANMFKSYDVHWGKDFELTGREVECL  194 (246)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LT~RE~eVl  194 (246)
                      ...+...++.+|+.++++.......+.....    ...........     ...........-...+....||++|.++|
T Consensus        94 ~v~al~~GAddyl~KP~~~~eL~a~i~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~v~~~g~~i~LT~~E~~lL  168 (233)
T 1ys7_A           94 RVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITV-----GPLEVDIPGRRARVNGVDVDLTKREFDLL  168 (233)
T ss_dssp             CCTTTTTTCSEEEESSCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE-----TTEEEETTTTEEEETTEECCCCHHHHHHH
T ss_pred             HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-----CCCCCCCCCCEEEECCEEEECCCHHHHHH
T ss_conf             9999977992999789987999999999998640245444322235-----87545654429999999996470478999


Q ss_pred             HHHHCC----CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             999859----9979999994-----9998899999999999807998
Q gi|254780694|r  195 TWISEG----KTSDEIAVIL-----GISRNTVNNYIASIMRKTATKT  232 (246)
Q Consensus       195 ~lia~G----~t~~eIA~~L-----~iS~~TV~~hl~~i~~KLgv~~  232 (246)
                      .++++.    .|..+|...+     ..+.+||+.|++++++||+..+
T Consensus       169 ~~L~~~~g~vvsr~~L~~~vw~~~~~~~~rtvd~~I~rLRkKL~~~~  215 (233)
T 1ys7_A          169 AVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGG  215 (233)
T ss_dssp             HHHHHTTTCCBCHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             99985378888199999998486778884769999999999717789