HHsearch results for GI: 254780694 and protein with PDBid: 1ys7_A
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=97.17 E-value=0.00039 Score=44.03 Aligned_cols=109 Identities=16% Similarity=0.175 Sum_probs=66.8
Q ss_pred HHHHHCCCCCEEEEECCCHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 3333214457147503373689999999717----875469899999999999999754201467798888897799999
Q gi|254780694|r 119 NITPPAGMDNRYCSLTFDVARIRIGLMLLFP----KGRIILRDRLWEIGLLAAYQANMFKSYDVHWGKDFELTGREVECL 194 (246)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LT~RE~eVl 194 (246)
...+...++.+|+.++++.......+..... ........... ...........-...+....||++|.++|
T Consensus 94 ~v~al~~GAddyl~KP~~~~eL~a~i~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~v~~~g~~i~LT~~E~~lL 168 (233)
T 1ys7_A 94 RVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITV-----GPLEVDIPGRRARVNGVDVDLTKREFDLL 168 (233)
T ss_dssp CCTTTTTTCSEEEESSCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE-----TTEEEETTTTEEEETTEECCCCHHHHHHH
T ss_pred HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-----CCCCCCCCCCEEEECCEEEECCCHHHHHH
T ss_conf 9999977992999789987999999999998640245444322235-----87545654429999999996470478999
Q ss_pred HHHHCC----CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 999859----9979999994-----9998899999999999807998
Q gi|254780694|r 195 TWISEG----KTSDEIAVIL-----GISRNTVNNYIASIMRKTATKT 232 (246)
Q Consensus 195 ~lia~G----~t~~eIA~~L-----~iS~~TV~~hl~~i~~KLgv~~ 232 (246)
.++++. .|..+|...+ ..+.+||+.|++++++||+..+
T Consensus 169 ~~L~~~~g~vvsr~~L~~~vw~~~~~~~~rtvd~~I~rLRkKL~~~~ 215 (233)
T 1ys7_A 169 AVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGG 215 (233)
T ss_dssp HHHHHTTTCCBCHHHHHHHHHCCCCC-CCCHHHHHHHHHHHHHHCC-
T ss_pred HHHHHCCCEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 99985378888199999998486778884769999999999717789