HHsearch results for GI: 254780694 and protein with PDBid: 2o8x_A

>2o8x_A Probable RNA polymerase sigma-C factor; promoter recognition, transcription regulation, helix-turn- helix motif; 3.00A {Mycobacterium tuberculosis H37RV}

Probab=98.05  E-value=8.5e-06  Score=54.70  Aligned_cols=49  Identities=18%  Similarity=0.142  Sum_probs=44.5

Q ss_pred             CCCCCHHHHHHHHH-HHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             88889779999999-98599979999994999889999999999980799
Q gi|254780694|r  183 DFELTGREVECLTW-ISEGKTSDEIAVILGISRNTVNNYIASIMRKTATK  231 (246)
Q Consensus       183 ~~~LT~RE~eVl~l-ia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~  231 (246)
                      ...|+|.+++|+.+ .-+|+|++|||+.|++|+.||++++.++..||-..
T Consensus        13 l~~Lp~~~r~v~~l~~~~g~s~~EIA~~lgis~~tvk~~l~Ra~~~Lr~~   62 (70)
T 2o8x_A           13 IADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLAD   62 (70)
T ss_dssp             TTSSCHHHHHHHHHHHTSCCCHHHHHHHHTSCHHHHHHHHHHHHHHHHC-
T ss_pred             HHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             98699999999998999099999999998979999999999999999998