HHsearch results for GI: 254780694 and protein with PDBid: 2rnj_A

>2rnj_A Response regulator protein VRAR; HTH LUXR-type domain, DNA binding domain, activator, antibiotic resistance, cytoplasm, DNA-binding; NMR {Staphylococcus aureus}

Probab=99.76  E-value=1.3e-18  Score=136.93  Aligned_cols=65  Identities=32%  Similarity=0.435  Sum_probs=62.3

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf             88888977999999998599979999994999889999999999980799889999999975898
Q gi|254780694|r  182 KDFELTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTATKTRSGAIAYAVRNNIV  246 (246)
Q Consensus       182 ~~~~LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLgv~~R~eav~~A~~~Gli  246 (246)
                      ....||+||+||+.|+++|+|++|||..|+||++||++|+++||+|||++||+|++.+|.++|||
T Consensus        26 ~~~~LT~rE~evl~ll~~G~s~~eIA~~L~iS~~TV~~~~~~i~~Kl~v~~r~elv~~a~~~gli   90 (91)
T 2rnj_A           26 LYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLI   90 (91)
T ss_dssp             TGGGCCSHHHHHHHHHHTTCCTTHHHHHHTCCHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHTCC
T ss_pred             HHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
T ss_conf             42617999999999999289999999997889999999999999990999999999999994899