HHsearch results for GI: 254780694 and protein with PDBid: 3hug_A
>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative stress, transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=97.98 E-value=1.3e-05 Score=53.42 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 8897799999999-8599979999994999889999999999980
Q gi|254780694|r 185 ELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKT 228 (246)
Q Consensus 185 ~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL 228 (246)
.|++++++|+.+. -+|+|++|||..|++|++||+.++.++..||
T Consensus 37 ~L~~~~r~vi~l~~~~g~s~~eIA~~lgis~~tV~~~l~Ra~~~L 81 (92)
T 3hug_A 37 QLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRAL 81 (92)
T ss_dssp TSCHHHHHHHHHHHTSCCCHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 799999999999999399999999998969999999999999999