HHsearch results for GI: 254780694 and protein with PDBid: 3hug_A

>3hug_A RNA polymerase sigma factor; ECF sigma factor, zinc binding anti-sigma factor, oxidative stress, transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=97.98  E-value=1.3e-05  Score=53.42  Aligned_cols=44  Identities=23%  Similarity=0.310  Sum_probs=41.8

Q ss_pred             CCCHHHHHHHHHH-HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             8897799999999-8599979999994999889999999999980
Q gi|254780694|r  185 ELTGREVECLTWI-SEGKTSDEIAVILGISRNTVNNYIASIMRKT  228 (246)
Q Consensus       185 ~LT~RE~eVl~li-a~G~t~~eIA~~L~iS~~TV~~hl~~i~~KL  228 (246)
                      .|++++++|+.+. -+|+|++|||..|++|++||+.++.++..||
T Consensus        37 ~L~~~~r~vi~l~~~~g~s~~eIA~~lgis~~tV~~~l~Ra~~~L   81 (92)
T 3hug_A           37 QLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRAL   81 (92)
T ss_dssp             TSCHHHHHHHHHHHTSCCCHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf             799999999999999399999999998969999999999999999