HHsearch results for GI: 254780694 and protein with PDBid: 3mzy_A

>3mzy_A RNA polymerase sigma-H factor; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; 2.50A {Fusobacterium nucleatum subsp}
Probab=97.91  E-value=2e-05  Score=52.27  Aligned_cols=44  Identities=32%  Similarity=0.443  Sum_probs=41.6

Q ss_pred             CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf             89779999999985999799999949998899999999999807
Q gi|254780694|r  186 LTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTA  229 (246)
Q Consensus       186 LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg  229 (246)
                      +++.++.++.+..+|+|++|||..||||++||+.++.++..||-
T Consensus       110 ~~~~~~~~~~~~~~g~s~~EIA~~lgis~~~V~~~~~Ra~~kl~  153 (164)
T 3mzy_A          110 FSKFEKEVLTYLIRGYSYREIATILSKNLKSIDNTIQRIRKKSE  153 (164)
T ss_dssp             SCHHHHHHHHHHTTTCCHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf             76999999876562389999999989199999999999999999