HHsearch results for GI: 254780694 and protein with PDBid: 3mzy_A
>3mzy_A RNA polymerase sigma-H factor; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; 2.50A {Fusobacterium nucleatum subsp}
Probab=97.91 E-value=2e-05 Score=52.27 Aligned_cols=44 Identities=32% Similarity=0.443 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
Q ss_conf 89779999999985999799999949998899999999999807
Q gi|254780694|r 186 LTGREVECLTWISEGKTSDEIAVILGISRNTVNNYIASIMRKTA 229 (246)
Q Consensus 186 LT~RE~eVl~lia~G~t~~eIA~~L~iS~~TV~~hl~~i~~KLg 229 (246)
+++.++.++.+..+|+|++|||..||||++||+.++.++..||-
T Consensus 110 ~~~~~~~~~~~~~~g~s~~EIA~~lgis~~~V~~~~~Ra~~kl~ 153 (164)
T 3mzy_A 110 FSKFEKEVLTYLIRGYSYREIATILSKNLKSIDNTIQRIRKKSE 153 (164)
T ss_dssp SCHHHHHHHHHHTTTCCHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 76999999876562389999999989199999999999999999